miRNA Id: | VMR_0095 |
Virus: | Epstein Barr virus (EBV) |
Taxonomy: | View |
Nomenclature: | ebv-miR-bart1 |
miRNA Sequence: | ucuuaguggaagugacgugcugug |
Length: | 24 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 50 |
pre-miRNA: | ebv-miR-bart1 |
pre-miRNA Sequence: | gggggtcttagtggaagtgacgtgctgtgaatacaggtccatagcaccgctatccactatgtctcgcccg |
Arm: | 5p |
Cell line: | Lymphoblastoid Cell Line |
Method: | NGS, Northern blot analysis |
Reference: | 22291592 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |